rs29769815 SNP Detail

Summary

• ID
  rs29769815
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153361843 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCATCCTCTG GTCTTCCCTA TAGCTTCTCT GGCCTAATCG
  TGAGCACCGT GAGCCTGTGC AGATCCCTTC ACACCCCCAT GACAATGTCA ACCTCTCAAC
  K
  TAACTCAATT TTCTCCTCAA CCCTAAGGAA CCGCCATTAG ACTCATTTTT CTGATGAAGA
  AACAGAAGTT GCTACCTAGC TGGGTGCTCA GCACTGGCT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45360760	mCV22913994	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
ss147995291	ENSMUSSNP3815686	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29769815					SNP	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153361843 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Nol4l	nucleolar protein 4-like			Intron
				Noncoding-Transcript-Variant
Rr567668	regulatory region 567668			within coordinates