rs29770072 SNP Detail

Summary

• ID
  rs29770072
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:52057326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGTA CTCCACATAA TTTTTTTTTC
  R
  GTTTTAGAAA TAAGTGTATT CTGAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss45360081	mCV23305984	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss320302475	CHEV_2_52022834	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs29770072					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:52057326 () rs orientation: forward

Symbol	Name	Function Class
Neb	nebulin	Intron
Rr556914	regulatory region 556914	1475 bp distal
Rr556915	regulatory region 556915	1919 bp proximal
Tssr24033	transcription start site region 24033	1806 bp downstream