rs29773668 SNP Detail

Summary

• ID
  rs29773668
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:87785315 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGTACATGAA GTATCTTGTT TGTTTCCAGT TTCTGGCTAT TTGGAATAAA CCTGTTATGA
  AAATAGTAGA GAATTTACCC TTGGGGTATG GTGGAGTATC TTTTGGGCTT ATACCCAGGA
  GTCATATGGC TGGGTCTTTA GGTATAACTA TTTCCAATTT TGTGAGAAAG CAACATATTG
  ATTGCCAGAC AATTTCCTGA ATAGAACACC AATGACTGAG GTTTTAAGAT AAACAATTGA
  TAAATGAAAT TTCATGAAAC TGAAAAACTT CTGTGAGACA AAGGACACTG TCCATAGGGG
  R
  AAAAAAATCA GCCCACAGTT TGGAAAGTAA CTTCATCAAC CCTGTTGCCT ACAGAGAGCT
  AATAGCGAAA ATATATAAAG AAATCATGTA GACTCCAACA AACCAAATAA GCCCCCAAAC
  AATGGGGTAC AGAGCTAAAC AGAATTAGCA ACAGAGTAAT CTTATTGGCC AAGAAGCACC
  TAAATGAATA TTCAACATTC CTAGTAATCA GGGAAAAATG CAAATCAAAA TGACCATGAG
  ATTCTATCTT ACACCAATCA GAAGTCTAAG ATAAAAAACT TAAGCACATG CTATCAGGGA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45363194	mCV25336275	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A	G
ss146890010	ENSMUSSNP1895524	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29773668					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:87785315 () rs orientation: forward

Symbol	Name	Function Class
Rr373500	regulatory region 373500	1551 bp upstream