rs29773734 SNP Detail

Summary

• ID
  rs29773734
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:34444215 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAATAACTCA TTTCAATGTT GTTGCTAATA AAGTTCAAAA
  TATCCTATAG GAATCTACAA ATATGGTAGT TGAGAAATCC AGCCATGCTG TAGAAAAAAG
  R
  AATAAAAATT CATTCTCCCC TACTTAGATG GCATAAAGAA ACACAAAACT AATTTTTAAA
  CAAAGGAAAA CTTCTGAGTA TGATGGAGGA AATATAAAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39615371	mCV23082219	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29773734					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:34444215 () rs orientation: forward

Symbol	Name	Function Class
Apc	APC, WNT signaling pathway regulator	within coordinates
Gm54017	predicted gene, 54017	within coordinates
Tssr150452	transcription start site region 150452	1636 bp upstream
Tssr150453	transcription start site region 150453	1998 bp upstream