rs29776377 SNP Detail

Summary

• ID
  rs29776377
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:52059596 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTT CCTCCTGGGC ATCAAACCCA
  K
  GGGTAAACAC TGTAAAGCAA CATCC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss45362375	mCV23305688	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss146585102	ENSMUSSNP4733574	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
ss320302485	CHEV_2_52025104	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs29776377					SNP	T	T	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:52059596 () rs orientation: forward

Symbol	Name	Function Class
Neb	nebulin	Intron
Rr556915	regulatory region 556915	within coordinates
Tssr24033	transcription start site region 24033	443 bp upstream
Tssr24034	transcription start site region 24034	337 bp downstream
Tssr24035	transcription start site region 24035	924 bp downstream