rs29778459 SNP Detail

Summary

• ID
  rs29778459
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:30794649 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAGACGAA AGGATGGACC
  ATCTAGAGAC TGCCATACCC GGGGATCCAT CCCATAATCA GCTTCCAAAC GCTGACACCA
  TTGCATACAC TAGCAAGATT TTGCTGAAAG GACCCAGATA TAGCTGTCTC TTGTGAGACT
  ATGCTGAGGC CTAGCAAACA CAGAAGTGGA TGCTCACAGT CAGCTATTGG ATGGATCACA
  R
  GGCCCCCAAT GGAGGAGCTA GAGAAAGTAC CCAAGGAGCT AAAGGGGTTT GCAACCCTAT
  AGATGGCACA ACAATATGAA CTAACCAGTA CCCCTCGGAG CTGGTGTCTC TAGAAAAGCA
  ATTCTTGTTG AGTGAACAGA AAGATCTCTG AGGCTGTTTT TTATGAGAGC AACATGGGAA
  TATGAGGAAC ACATTGTCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39117299	mCV23902076	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148828514	ENSMUSSNP3317267	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29778459					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:30794649 () rs orientation: forward

Symbol	Name	Function Class
Gm35109	predicted gene, 35109	375 bp downstream
Rr476610	regulatory region 476610	553 bp distal