rs29782177 SNP Detail

Summary

• ID
  rs29782177
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:59752107 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CAGACCAATT TAAAAACAAA GACAGCAGCA ACAACAACAA AACAAAAACC AATAGATCAA
  ACAAACACAA AATCAGAAAA CATACTAAAT AAAAGACAAA TAAAGGGTTT TTTGTTGTGG
  TTGTTTTGTT TTTAAAAATG GCCTAAACAA AGCATTATGA GACCAAACAT CTCCAAAAAC
  ACTAGTTTTT TGTTGATCAT GTACTGCTAG GCATGGGGCC TCCCTTAAAG TAGTTTGTAT
  ACCTAGTCAG ATTCTGCTGG AGAAAACTAA TTTTTCCTTT GCAGGCTGTC AGTTGTCTCA
  R
  GTTTGGGATT AGGAATGGGG ACTTGTGTCC ACATCCCTCT CTTAGCACTG ACCTATGCAG
  GGCCTGTGCA TGCTGCCACA GTGTCTGAGT TCATATGTGT GTCAGTCTTG TGTCTGGAAG
  ACACCGTTTC CTTAGTGTCT TCTATCCCCA TTGATCTTAA CAATAGTGCA CTGTGTGCTG
  AGCAGAAGGC CAGCCTGATG AATCCCTGCC TGGATTATGG GTTATAGTCA GTATGTAGCT
  TTTTTGGGTT CACTGATTTT TGTTCATAAG CCCACAAAGT TTTCAAAACA TTTTAGTGGC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39118310	mCV24571662	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29782177					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:59752107 () rs orientation: forward

Symbol	Name	Function Class
Gm47246	predicted gene, 47246	within coordinates
Naa35	N(alpha)-acetyltransferase 35, NatC auxiliary subunit	within coordinates
Rr276812	regulatory region 276812	694 bp proximal
Rr279913	regulatory region 279913	1361 bp proximal