rs29782535 SNP Detail

Summary

• ID
  rs29782535
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:63794626 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTGA ACTCAGGTCC TCAGGCGTCC
  W
  CAGCAGGCCA AGTACCTGCT GAGCC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46339239	mCV25257574	ABI	CRAMUS_MOUSE	f	SNP	T	A	T	T
ss322984102	CHEV_9_63735151	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29782535					SNP	T	A	T	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:63794626 () rs orientation: forward

Symbol	Name	Function Class
D9Mit175	DNA segment, Chr 9, Massachusetts Institute of Technology 175	919 bp distal
Rr49	regulatory region 49	within coordinates
Rr959	regulatory region 959	within coordinates
Rr2247	regulatory region 2247	726 bp distal
Rr196462	regulatory region 196462	1775 bp proximal
Rr201236	regulatory region 201236	1826 bp distal
Rr201237	regulatory region 201237	1575 bp proximal