rs29785383 SNP Detail

Summary

• ID
  rs29785383
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:60989448 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCAGGGTA GGCAGAAAGC
  AAAGCCAAGG GCAGCCATAC TGGGGGAAAG CCATCATTCC TTAGGGGGAT GGCCTGGGTT
  GGCGGGAGGG GAAAACCAAG GAGCAAGCCC CCATACCTAC AACACCTACA ACGAAGATCC
  CATATTCATC ATACAGCCAG GTAACCAGCA CCCTTCTCTG TTCAAGCTGC TAGGAAGCCT
  R
  GCCTCAGAAT ATCCCAAATG CAGCCTCCGC CTACTCTCTC CTGGCTCATT GAGATCAGAA
  GGATGAATTG GCTTGCCATC CAGCTATGTC AAGCTACATG AAGGTAAGAA TTTGCTTCTG
  ATAATTTTCA CTTCTCATAT CTACTCATAA AACTATGTTG TAGTTTTCCA TCGATCAACA
  TCTTAAAAGA CAAAGTTCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46340294	mCV24173884	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss136537163	ENSMUSSNP3317444	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss322978168	CHEV_9_60929973	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29785383					SNP	G	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:60989448 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21877	CpG island 21877	283 bp distal
Gm34004	predicted gene, 34004	within coordinates
Rr204410	regulatory region 204410	517 bp proximal
Rr209953	regulatory region 209953	within coordinates