rs29786094 SNP Detail

Summary

• ID
  rs29786094
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:115907918 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCAGCTCAG TCTATCAATG
  TTTGAACTTG AGATACCAAA ACTGCCAACA CTGGAAGAGC TACATACTCC TCTTCATTTT
  TCTTCTTTTT CCTCCTTCTT CTTCCTCCCC ATCTTCTTCC TACTCCTCCT TTTTCTCCTC
  CTCATTCTCT TTTTTCTTCT CTTTCCTTCC TCTTCTTCAT CCTCTTCCTG TCCTCTCCCT
  Y
  ATCCTCCTCT TCTTCCTCTT TGCCTTTCTC CTCCTCATCA TCTTTTTTCT TCTTCCTCCT
  CCCCCTTCTT CCTTCTCCTC TTCTTCTTTG TCCTCCTCTC CCTCCTCTTC TTCTTTCCCC
  TCTTTTTAGT CATTATCTTC CTCCTCCTCC TCCTCTTCTT CTGATTTCCA TCTGTGTGAA
  ACAAATGACC CCAGCAAGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46341195	mCV23304232	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs29786094					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:115907918 () rs orientation: forward

Symbol	Name	Function Class
Gm18328	predicted gene, 18328	1105 bp downstream
Rr368885	regulatory region 368885	1565 bp downstream
Rr687945	regulatory region 687945	1114 bp distal