rs29786140 SNP Detail

Summary

• ID
  rs29786140
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:77838012 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTGTGTG TGTGTGTGTG
  TGTGTGTGTG TGTGTGTTTT GGGAGGAGTT TTCCTTCCTC CCTCCTTGAT CCGTCCCCTC
  CTACCCTGCA AGGTCTCACT ATGTAACCTT GGTGGCTTTC CTGGAACTCT AGACCAGCCT
  GGCCTTGAAC TTCACAGAGA TGTCCTTGCC CGTGTCTCCC AGCTGCTGGG GTTAATGGTG
  W
  GCACAATCAT GCCTGAGTCT CTCTCACTTT GTACAATTGC TCCCCTTCTA TTTGGAGTCA
  GCCTGGACAT TTACTTCCTG TAGTCTCTGT TGGTTATGCC TTCAGCCCAT GCCTGGACCA
  CTGTCTTCCA CGTTTTGGCT ACTGTCCAGC CTACCCGAGC TCTCAGGGTA GAATGCCATT
  CTCTCGGAAG CCTTCCCCCC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46341703	mCV25042342	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	T
ss136662703	ENSMUSSNP3994314	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29786140					SNP	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77838012 () rs orientation: forward

Symbol	Name	Function Class
Elovl5	ELOVL fatty acid elongase 5	Intron
Rr401538	regulatory region 401538	135 bp upstream
Rr683432	regulatory region 683432	440 bp distal
Rr683433	regulatory region 683433	121 bp proximal
Rr683434	regulatory region 683434	1957 bp proximal