rs29790867 SNP Detail

Summary

• ID
  rs29790867
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:121743327 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTCT CCAGGCTTGG CTCCCAAGCC
  Y
  GTAGCCTGTG GCTAGACCAC TTTCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46342740	mCV23340122	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss137070847	ENSMUSSNP641364	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
ss323232577	CHEV_9_121823379	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29790867					SNP	C	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121743327 () rs orientation: forward

Symbol	Name	Function Class
Cyp8b1	cytochrome P450, family 8, subfamily b, polypeptide 1	95 bp downstream
Tssr92081	transcription start site region 92081	419 bp downstream
Tssr92082	transcription start site region 92082	558 bp downstream
Tssr92083	transcription start site region 92083	914 bp downstream