rs29791251 SNP Detail

Summary

• ID
  rs29791251
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:29783230 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCTTGCAG ACCTGCCCAG
  GGGTTTCTCA CCTAGATGGC TGTAAAGCTA AAGGAAGGTG TGTCTTCCCA CCTCACAGAC
  CTGCCCAGGG GTTTCTCACC TAGATGACTA TAAGACCCAG CAAGCTGACC TCAACATTAA
  CCACTGCGTG TAACATACAA CACACACAGG ATACAAATAC TAAAGCTACA TACACATTTC
  W
  TATCATGTTG TTTATTCTTT GTAACATATA AATGCTAAAT GCAAACAAAA AAATCTAAGC
  CTGAAAGCAC TAGACCAAGG CACAAGTGTA AGGTCTTATT CATAAAAAAC TTATCTTTAT
  TTTTTTATTC TTGGCTATAA GAATACTTAA TAAATAGCCG GTCTGATGAT AGGATTAGTA
  TCCCTTGGGT AAATTTTCTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46882402	NES10801168	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	A	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29791251					SNP	T	T	T	T	T	A	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46882402	NES10801168	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:29783230 () rs orientation: forward

Symbol	Name	Function Class
Gm65548	predicted gene, 65548	within coordinates
Rr574681	regulatory region 574681	1074 bp proximal