rs29793783 SNP Detail

Summary

• ID
  rs29793783
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:109759418 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTAGAAAT TGCTACAGAA
  AAATTTGCAT GAAATATGTG TATATGTATT TATACACAAG TGCTGGAACC ATTTGCACGT
  ATTCACAAAC TCCTCAGCTC ATCAGAATTG AAAGATTAAT GTCCACTTTC AATCAGTATT
  GCAAGGGTGC CTGGTGACAT CGAACATTTT ATGCTCATTT ATAGTATCAA TGGATTAATT
  M
  TATGTGGCTC AGAGCATATA TTGAGCTAGG CTTTTGTTCT GACCACCTTA CTGAGTAAAC
  CCTATGTGCA CCCGTGCAAA TATAGCTGCA TGTGCAGTAG GTCTCTCTTG ATACATTATG
  AGGTGCAAGC ATTAACTGCT GAAAAATCAT TTGACAGCTT GTTTGATTAA TTTCACATAG
  TCATCCTTCT TACTCTTCTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46882923	NES10708208	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29793783					SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46882923	NES10708208	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109759418 () rs orientation: forward

Symbol	Name	Function Class
Ntng1	netrin G1	within coordinates
Rr65057	regulatory region 65057	983 bp proximal