rs29795190 SNP Detail

Summary

• ID
  rs29795190
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97746734 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAC ACACAGTCCA CTGGCATGGA
  W
  GGGTGTCACA GAGGGAAGGA ATGAA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46343511	mCV23202426	ABI	CRAMUS_MOUSE	f	SNP		A	A					T		A
ss47762598	NES11294642	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A		A	A	A	T		A	A	A	A		T
ss136835930	ENSMUSSNP5809411	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A							A
ss323123527	CHEV_9_97765100	CHEVERUD	SCREENING_POP	f	SNP													A					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29795190					SNP	A	A	A	A	A	A	A	T	A	A	A	T	A	A	A	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47762598	NES11294642	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97746734 () rs orientation: forward

Symbol	Name	Function Class
Clstn2	calsyntenin 2	within coordinates
Rr198247	regulatory region 198247	734 bp distal
Rr205510	regulatory region 205510	774 bp distal