rs29795217 SNP Detail

Summary

• ID
  rs29795217
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:66825347 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCAG CAAATCCTCC TAACCACCAT
  R
  GCAACTTTCC AGCCCCTTTG ACATA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46343519	mCV23180033	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss136576036	ENSMUSSNP6085042	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss322989025	CHEV_9_66765872	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29795217					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:66825347 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21974	CpG island 21974	953 bp proximal
Rab8b	RAB8B, member RAS oncogene family	within coordinates
Rr368814	regulatory region 368814	1338 bp upstream
Rr401489	regulatory region 401489	1608 bp upstream
Rr681811	regulatory region 681811	1031 bp distal
Rr681812	regulatory region 681812	397 bp distal
Rr681813	regulatory region 681813	96 bp distal
Rr681814	regulatory region 681814	1612 bp proximal
Tssr85773	transcription start site region 85773	773 bp upstream
Tssr85774	transcription start site region 85774	800 bp upstream
Tssr90293	transcription start site region 90293	1455 bp upstream
Tssr90294	transcription start site region 90294	275 bp downstream
Tssr90295	transcription start site region 90295	1101 bp downstream
Tssr90296	transcription start site region 90296	1581 bp downstream