rs29798988 SNP Detail

Summary

• ID
  rs29798988
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:54536229 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTT GCCAAGGATG GGGACGGGCA
  R
  AAGCAAAGCT CGCATCAGCT CACAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss46343960	mCV23898552	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss136506544	ENSMUSSNP1237639	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss322965389	CHEV_9_54476752	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs29798988					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:54536229 () rs orientation: forward

Symbol	Name	Function Class
Acsbg1	acyl-CoA synthetase bubblegum family member 1	within coordinates
Rr195671	regulatory region 195671	within coordinates
Rr195672	regulatory region 195672	972 bp proximal
Rr195673	regulatory region 195673	1972 bp proximal