rs29799448 SNP Detail

Summary

• ID
  rs29799448
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:36010487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTAGTGTGT GATTGTTATG
  AATCAAATGC TATGGAAACG GACACCAGGT GAGGGATGAG ATTATGGGAA GGCTTCACAG
  AGGAGAAGAA AATATCTGAG TTTGGCCTTG GGGGATTAAG TAGGAGTCTG ATAGGCAAAG
  ATGAGGCGTT GCAGGGAATG TCAGCACAGG CAAAGAAGAG GAAAGGCGTG CAGCACAGCC
  R
  GCTGGAAAAG CAGGTTGGAA TAAGATCCTG AAAATCAGAC TTGGTATGCG AGGATGGCGG
  TGGGAAATAT TTATGCAAGG TGGGGGGAGT GCCGGGGTTT AAAAAATCAA GGGCGGAGGG
  TGATTGTCTC ATGGTGGTAG GGTAGGATGG GAAAGGAGAA AGACTGTGGG TGGTAGCAGT
  AGCTAGAAGC CTGCCGCACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss46883658	NES10953200	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs29799448					SNP	A	A	A	A	A	A	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46883658	NES10953200	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:36010487 () rs orientation: forward

Symbol	Name	Function Class
Rr690667	regulatory region 690667	1656 bp distal
Slc25a43	solute carrier family 25, member 43	within coordinates