rs29800290 SNP Detail

Summary

• ID
  rs29800290
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:36010949 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGTTTGCT GACTTGATTT
  CTTGACAGAT GGTTTTCTTT CTGAAAACTG AAGAGAAACC ATTCCAGGGA AAGACGAGGT
  ATAGTAAGAA AGGTTGATTA GTCGTGAAGG CATCTGCCCT ACATAAAGAT GACAATCATG
  GGTAATCAGT ATATCCATTC ATTTGTCCTC TGTCCTGACC ACGAAGTTGC AAAACAGGTG
  W
  CTGGGAATCA CAGCACACTG TCTGATTGGA ACAAAACATG CAGCGTAATC AGTGACTGGA
  GTGGATGAAA AAAAAAATTT GTCTATAATT ACAATGACTG AGCTCAAGCT TAAAAACAGA
  TCCTGTGGCT CCTTAGTCCA GGGCTCTGCC TACTACCACA CAGCTAAAAT CTCTGCTTGA
  TTGGATGGAC AATGAAAGGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46883670	NES10953204	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	T	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29800290					SNP	A	A	A	A	A	A	A	A	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46883670	NES10953204	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:36010949 () rs orientation: forward

Symbol	Name	Function Class
Slc25a43	solute carrier family 25, member 43	within coordinates