rs29807995 SNP Detail

Summary

• ID
  rs29807995
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:121264975 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGGC CTCGAACTCA GAAATCTGCC
  Y
  GCCTCTACCT CCTGGGTACT GGGAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45364287	mCV22586067	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	C
ss147386038	ENSMUSSNP2910716	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss320483151	CHEV_2_121260230	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29807995					SNP	C	C	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:121264975 () rs orientation: forward

Symbol	Name	Function Class
Pdia3	protein disulfide isomerase associated 3	within coordinates
Rr563821	regulatory region 563821	442 bp proximal
Rr563822	regulatory region 563822	547 bp proximal
Tssr19765	transcription start site region 19765	957 bp downstream
Tssr19766	transcription start site region 19766	483 bp downstream
Tssr19767	transcription start site region 19767	1417 bp upstream
Tssr19768	transcription start site region 19768	1861 bp upstream