rs29818018 SNP Detail

Summary

• ID
  rs29818018
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131823203 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAAAGGTGAC ATCACTGTCG AACTAGGCAC CAGCTCAGAA
  GGCAAGGGCT GAGTTCAGCA GATGGGGGGT TTTCCACATG TATTTAAAAC TCTTGTTTAA
  W
  ACCCTGTTCA GAACTTCTGG ATAGGCGAAT GTGGGGGCAC CCACTCCCCC ACTGCATCTT
  AATACATTTC ACTACTCCCA GCTCCTCTAA AGGAGAGTG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45368092	mCV24483742	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	A
ss147615337	ENSMUSSNP1605971	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T		A
ss320508121	CHEV_2_131807019	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29818018					SNP	A	T	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131823203 () rs orientation: forward

Symbol	Name	Function Class
Rr565361	regulatory region 565361	2 bp distal
Rr565362	regulatory region 565362	1243 bp proximal
Rr565363	regulatory region 565363	1459 bp proximal
Rr565364	regulatory region 565364	1688 bp proximal