rs29818247 SNP Detail

Summary

• ID
  rs29818247
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:121484906 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTGAACCTAA GAGTCAGAGG CCAGCCTGGA TAATTCAGCC AGATCTTAGC TCAAAACATC
  TACCCTACCT TCTTAGTATG TATGTTCCCG TGTGTGCATA TGTGTGTGTG CACATGCTCA
  ACACTGGATG TCTTTCTCAA TTGCTCTTGC ATTATTTGTG AAGCAGTCTC TCACTCAGCC
  TGCAGGCACT GATTCAGCTA GCCTAGCTGA CTACCAAGCA CCAAGGTCCT TCTCACCTCC
  ATATCCCAGC ACTGGGATTA CAAGTGCTCA TTTTTTAAAA ACATGGGTGA TCCAAACTCA
  R
  GTCTTTATGC TTGTGTGGCA ATTACTTTGC CATTGGAGCC ATCCCCCAGC CTCTCTTTCT
  GGGGTGTCTG AAGTGTGATT CTCCCAGGGT CTTTGAGGCT TTGTGTTTTT TGGGTAGTAA
  CAGAGGGTTC TAGAATGTGG GCTCTTGCTC TAAGTTTATG AGAGAAATAA CATTGCCTTT
  GAGTTCCCTT CTTAGTTGTC CAAGTCAGAA CGGGGAAGAG ACAGACGTTG AAATGAAAGC
  TGGGCATGGT GGCCTGCAAT CCTGGCACTC AGGAATCAAG GAAGGCAGAG GATCCCAGGA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45367501	mCV23864539	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29818247					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:121484906 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Frmd5	FERM domain containing 5			Intron
				Noncoding-Transcript-Variant
Rr563864	regulatory region 563864			789 bp proximal
Rr563865	regulatory region 563865			1562 bp proximal