rs29822761 SNP Detail

Summary

• ID
  rs29822761
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:132648487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAGCTCATC CTGTTTCCTC
  TCGCTCTTTA GTCTATGTAC GTGGCAGCAC AGGACAGGGT CACTTCATAT TCAGTTACCA
  CCTCTACAGA TGGCAAGGTC TTGAGGGTAG CATAACTAGG TATTTGCATT TTAAATACCT
  CTGGACTAGA GTTACAGAAT GTGTATCTGA TATGAAAAGC AGGCCAGAAA GCCAGGTAGC
  Y
  AGGATATTTT TCTAAGTGAC AGGCAGACAT TTCCACCACT GCCACTGTAA AACCGTGACT
  CTATTTAAAC AACGTACAGC ATTGCTGCAA GAAGCCAGCA ATCCCAGAGA CCAACTCTTG
  GGCCTGGCAG TGAGAACGCT TACCTGGTAA TTTCTGAGCC AGGTTTCAGA CAACCTCAGG
  TTAATGACTC CTCCCCTCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45367563	mCV23920069	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss147622808	ENSMUSSNP1912235	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
ss320509753	CHEV_2_132632303	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29822761					SNP	T	C	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:132648487 () rs orientation: forward

Symbol	Name	Function Class
Trmt6	tRNA methyltransferase 6	within coordinates