rs29823168 SNP Detail

Summary

• ID
  rs29823168
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:148893314 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGG TCCTGGGAGC TTCTGGCCTC
  S
  GCACAGTCTT CTCTAGTCCT AGAAT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45866252	mCV22844428	ABI	CRAMUS_MOUSE	f	SNP	C	G	C
ss321719755	CHEV_5_149768080	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29823168					SNP	C	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:148893314 () rs orientation: forward

Symbol	Name	Function Class
1810059H22Rik	RIKEN cDNA 1810059H22 gene	within coordinates
Gm15406	predicted gene 15406	within coordinates
Gm15409	predicted gene 15409	within coordinates
Gm52833	predicted gene, 52833	within coordinates
Rr378799	regulatory region 378799	259 bp upstream
Rr625340	regulatory region 625340	1876 bp distal
Rr625341	regulatory region 625341	1771 bp distal
Rr625342	regulatory region 625342	within coordinates
Rr625343	regulatory region 625343	301 bp proximal
Tssr54595	transcription start site region 54595	742 bp upstream