rs29823455 SNP Detail

Summary

• ID
  rs29823455
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:43858005 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATATCCTC AGAATGATAA
  TGATTAATAT CTAAATCTTA ACTGCTGGGA CCAAGTCTAT TCTTCCTGGA CGTATCTACT
  TGTACTTTTA CCTCCAAAGG GACTGGAAGA TTTAAATTCC TTTGTGGATT TTCTGGCAGT
  GGAGGGAAGT CTGACCTTTT ATGCCCTTTA TTTCTTCCTT ATGAGGTCTA TAGGTTTTTA
  M
  TGTCATCTTT TATGAAACCA TCTCCTTTGA TCTTGGGCTA TAGTTATCTC TTTTTTAGAA
  CAGTTAAGTA AGCAAGAATC ATTAACCTTA GTGAGTTCCT CCTGCAGAGT GCACCAAGGG
  CAACCGGAGG AACCGGTTTC TGTGGTAGAC TGCAAAGAGG CTTAATTTCC TTGTAGAATC
  TTTAGACAAA TTATCAAAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39617905	mCV24147696	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
ss147020824	ENSMUSSNP2913607	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
ss325601058	CHEV_18_43884594	CHEVERUD	SCREENING_POP	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29823455					SNP	A	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:43858005 () rs orientation: forward

Symbol	Name	Function Class
Rr345822	regulatory region 345822	1996 bp proximal
Rr348914	regulatory region 348914	195 bp proximal
Rr393629	regulatory region 393629	within coordinates