rs29826009 SNP Detail

Summary

• ID
  rs29826009
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:110011582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTAAAACT TCTCTCGCAA
  GATGTCAAAT ACATGGGGCC CATTGAAAGA AGAAGGATTT ACCATACAAG ACTGTCAGGC
  AAATCACAGA GACTCTGGTC AGGGTCATAA CTGGTTGTCA GAAGAACTTT GACTCAGTCC
  TTGGTTTCTC CTCTTGTTCG AGTTAAAAGG AAAATACTTA AGGTTGTCCA ATTTATCTAT
  M
  GTTAAAAATG AGAAATATCC ACCCATTTCA ACCAGGGACC AGTTTTCTAA AGATGTACCA
  GTCTTTCTGT GTCCTAGGTC AGAGCGCTTC TGACTGTGAG TTCATAAAAT GGAGTGCAGA
  AGAAAGAAAG TACTCAAACT GGAAAAGAGC ACTGAACCAG TGGGCTGGGG GAATGTGTTA
  CAGTGCATTA GGCAAAGCAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	PWD/PhJ
ss46884839	NES10703504	PERLEGEN	MM_PANEL2	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	PWD/PhJ
rs29826009					SNP	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46884839	NES10703504	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:110011582 () rs orientation: forward

Symbol	Name	Function Class
Ntng1	netrin G1	within coordinates