rs29826483 SNP Detail

Summary

• ID
  rs29826483
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32627991 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGTA ATGCACGGTC TGTGGTGTTA
  Y
  ATTATAGGGC TCAGTACTTG GCCAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46344295	mCV22733945	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss136250144	ENSMUSSNP6593735	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29826483					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32627991 () rs orientation: forward

Symbol	Name	Function Class
Ets1	E26 avian leukemia oncogene 1, 5' domain	within coordinates
Rr368708	regulatory region 368708	570 bp upstream
Rr676235	regulatory region 676235	1121 bp distal
Rr676236	regulatory region 676236	163 bp distal
Rr676237	regulatory region 676237	641 bp proximal
Tssr84287	transcription start site region 84287	64 bp upstream
Tssr88694	transcription start site region 88694	1413 bp downstream