rs29827604 SNP Detail

Summary

• ID
  rs29827604
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:110012031 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGAAACAGT GCTATATGAT
  TCTTAGACTC ATATCACACA ATGGCTTGGA AGTGAAGTAT AATTTCAGTC ACTACTAGAG
  AGCTGTTATG CTGCCCTTGT GGGCTGGTTA ATTCATTACT GCGCTCTCCT GTACCAAGCT
  CACACACCAA TTTGAAACAG AAAAGCCATC TAGCCTGAGT GCTATGATGT CTCTAGAAAT
  Y
  GTAGCTATTC TTAAGAGTCA AGTTCAGGAC ATGAGAATCG CAGGAGGATA ATTCCAAATC
  CTCTAGTCTA GAGATTAATA GAAAAACTAC TTTCTTATAT TGAAGAAGGT ACCGGGCATG
  GGCAGTTTTA AAATGTCAGG TTCCTTTATT TTCCAGTAAA ATTCAATAAA TTTGCTTTCA
  TTGGAATTCC ACTTTGGAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss46884854	NES10703517	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	T
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs29827604					SNP	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46884854	NES10703517	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:110012031 () rs orientation: forward

Symbol	Name	Function Class
Ntng1	netrin G1	within coordinates