rs29829282 SNP Detail

Summary

• ID
  rs29829282
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:147825108 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATTCTATTG CCTTAAAAAA CATATAATGC ATGCTAAACT
  TAATATTAAA GAATGGTAGG AAACCATGCA TGAATTCCAC TGGCATTCCC AGTTGTGACC
  R
  TCACTCTGCT AATACATTTC CAGAGTGAAT TCCCTTTGCC TGGAGATTCT GAATGGGAGA
  ATCTGAAGAG GTTCCTCAAC CTCTGGTTTT GTCTAAATT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	MSM/Ms
ss45368443	mCV22895828	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss147908133	ENSMUSSNP6222964	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	MSM/Ms
rs29829282					SNP	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:147825108 () rs orientation: forward

Symbol	Name	Function Class
9030622O22Rik	RIKEN cDNA 9030622O22 gene	within coordinates
Rr374033	regulatory region 374033	788 bp upstream
Rr566833	regulatory region 566833	1361 bp proximal