rs29830311 SNP Detail

Summary

• ID
  rs29830311
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119665732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTAATAAGT GGATATTAGC
  CCCACCCCAC CCCCAAATTA CAGAATACCT AGGATACAAT CCACAGAACT CAAGAAGGTT
  AACAAGAAGA AGGGCCCAAG TGAGGTTGCT TCAATCCCAC TTGGGAGGGA GAAGAAAGCA
  ATCATGGGAG GAAGAAAGAA GGAGGGACCT AGGTGGGAGA AAGGAAAGTG GGGGGGGGGG
  R
  ACATGATCAG GTATGGGGGC TGGGGAGCAG GATAGGAGAG AAGCCCTGAG GGCCAGCAGG
  ATGAATGGAA ATATGCAACC TCGGAGGTTG GGAGGTAGGG GATCCTCTAG AATGTACTAG
  AGACCTGGGA GGTGAGAGAC TATCAGGACT CAAAGGGAAA TGCTTAGATG AAATGCTCAA
  CAGTGGAGAG AGAGAACTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45868135	mCV24968841	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss133592548	ENSMUSSNP4284450	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29830311					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119665732 () rs orientation: forward

Symbol	Name	Function Class
Erc1	ELKS/RAB6-interacting/CAST family member 1	within coordinates
Tssr58512	transcription start site region 58512	1421 bp upstream