rs29831715 SNP Detail

Summary

• ID
  rs29831715
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:24183868 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATAAAATA AATAAATAAA
  TCTTAAAAAA AAGAACAAAC TAAAAAACAA CTTATTTGCT TGTTTCAGGG CTGGGGCTTG
  GACTCAGAGC TTCCTGCATG CTGAACAAGC TCTCTGCCAC TGACCCTAGC CACCATGATT
  GTCCTAACAT TGACTAATCG TCTCCTTCCA CTGACCTGAA ATGCCATTTT CATGCCATTC
  R
  CCCTTGTTCC ATCTTTTGAG TGGTTGGGCT TCTCCTTCAT GATTCTATTG CTTCTTTGAT
  TTTTACCGTA CCCACTGTTC CAGTTCCTGT AACCTGGTCT GATCTACCTC ACCACCATCA
  CATTGCTAGA CTCTTTTTTT CAGACATTTT CTTGTCATTC TCAGCATCTT ATAGTCTAGT
  AAATTACTTT TAATCCCTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss39620883	mCV23641159	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss325557936	CHEV_18_24209312	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29831715					SNP	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:24183868 () rs orientation: forward

Symbol	Name	Function Class
Rr393422	regulatory region 393422	within coordinates
Rr405565	regulatory region 405565	371 bp downstream
Rr534883	regulatory region 534883	613 bp distal
Rr534884	regulatory region 534884	704 bp distal
Rr534885	regulatory region 534885	1305 bp proximal