rs29832102 SNP Detail

Summary

• ID
  rs29832102
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:119499832 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAATAATAAA TAAATCTTAG AAGAAAAGAA AAAAGAAAGA
  AAGAAACAAG AGCAAAAATA GAAAAGGTGC TCTTGATGAT GTCCCAAGAA CCACCTACAA
  R
  TCCTTCTCCA TATTCTCCTA TATCCATACG CCTCTAGCAT GGATAGAGTT CAAATATTTT
  GCCAGGCGTG GTGGTGCATG CCTGTAATTC TAGCATTCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39123892	mCV23813964	ABI	CRAMUS_MOUSE	f	SNP		G	A			A		G
ss52698264	NES15540381	PERLEGEN	MM_PANEL2	f	SNP	G		A	G	G		A	G		G	A	G		A
ss145469310	ENSMUSSNP6072954	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A					G
ss324555673	CHEV_13_120152103	CHEVERUD	SCREENING_POP	f	SNP									A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29832102					SNP	G	G	A	G	G	A	A	G	A	G	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52698264	NES15540381	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:119499832 () rs orientation: forward

Symbol	Name	Function Class
Nnt	nicotinamide nucleotide transhydrogenase	within coordinates
Rr270671	regulatory region 270671	within coordinates
Rr285835	regulatory region 285835	50 bp proximal