rs29836846 SNP Detail

Summary

• ID
  rs29836846
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:106519945 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAC AAAGATGGCT GCTCCAGGCA
  Y
  CCTGGTGCCC AGGCCCTGGG AAGAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46348587	mCV23588574	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss136939113	ENSMUSSNP4331150	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
ss323186496	CHEV_9_106545077	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29836846					SNP	C	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:106519945 () rs orientation: forward

Symbol	Name	Function Class
Gm28111	predicted gene 28111	within coordinates
Grm2	glutamate receptor, metabotropic 2	1788 bp downstream
Rr686373	regulatory region 686373	418 bp proximal
Rr686374	regulatory region 686374	610 bp proximal
Rr686375	regulatory region 686375	1238 bp proximal