rs29838654 SNP Detail

Summary

• ID
  rs29838654
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:115456278 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGTAAAAAG GCAAACTATA
  GGCAGGGGAG GGGAGATATT TGCAGACTAC ATATTTGACA AGGGATTTTC AACTGCGAGC
  TATAAAGAAC TCTTACTACT TGAACCGAAA CATTATACAG GCGAGCCAAC CTAGAAAATG
  AATAAAAGAT AGCAAATAGG TATTTCACTA TAGATGAACC CACAAGAAGA TGTTTAATGT
  M
  ATAAGCCATC CAGAAGCTGT AAGTTAAATT CCTAATAAGC AATGCAGATA CATCTCTCAG
  AAGAACTAAA ACAATTTCTT AACGATTTAC CTTATTTCTT TAAAGTATGT AAATACTTGA
  TACAGTGTGT GGCTTTGTGC ACAAGGGTAC AGGTGTCCAC AAAAGCCAGA CTAGCACAGG
  GCTGGCGTTC CAGGCTGTGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46347607	mCV23199493	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	C	C
ss137015232	ENSMUSSNP3656851	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29838654					SNP	A	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:115456278 () rs orientation: forward

Symbol	Name	Function Class
Gm68175	predicted gene, 68175	within coordinates
n-R5s92	nuclear encoded rRNA 5S 92	492 bp upstream