rs29839811 SNP Detail

Summary

• ID
  rs29839811
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:52582852 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CATTATCTGC ATCAATTCCA ATCTGGGACA CAGAAATGGT AATTTGGAAA AGAGATTAGG
  CTTCAATATT CAGCCCCAAA GGAACATGTA TATATGTATA TGTGCTTGTA TATATGTATA
  TGTGTATCTA GTGTTTTGTA AATTAATCCC TGTTTGGGAA ATTCAAATAA CAAGAAAATG
  GATCCACGCC AGCCCAGTGA AAGCAAGCTA TGTTAATATC CATCCTTCTA TCACATCAAA
  CAGATGAGGT TAAAATGTCT TCCTCCTGGG GCTGGAGATG TGAGATTGAG TGTTTGGTTT
  K
  GAGTTTTTTT TTTAAATCAC TAATTTATAT TTGCTGCTGC CTTCAGGTCA AGCTAGTTGC
  TCATTCTCAC TTCAGTACCT AATACTCAAT AGAAGTCCAT CTCAGGTCAA TGTCACAATT
  TCCTATACAC AATTTAGTGA CCACTTAGGA ATTCTAGTCA AACTAGGAGG GTTATAGTGA
  GTAGCAATAA GGAAACAAGT ACAAGGTGAT TAAAATTTTA GGGGAAAGGA GAATAAGACT
  TAATGAAGCA CACTTGCTTT GCAAGAATGC AAAGGTTTAG CACAGGGGCA GGGTAGAGCA
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46345474	mCV25222806	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29839811					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:52582852 () rs orientation: forward

Symbol	Name	Function Class
AI593442	expressed sequence AI593442	1490 bp downstream