rs29847210 SNP Detail

Summary

• ID
  rs29847210
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:3899901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGTACCCT TCTATGGGTT
  GATTTATTGC TTGAACCAAT GGCCTTGCAA GGACAGACTG ATCACTTGTA TATGCTGCTT
  TGTAGCTGGA TAAATCCAAA GCCATAGTGA AACACAATAT AATCAAATAG GCTGACTGGG
  GAGTCACAAG CAACAGTCTT GAATAAGGAA GCAAAGGCAT TCTGTGCATG GCAGGGTTTG
  R
  AAACATCTGC TTCAGAACAT TGTCATCCTA GGTTTCTGTC CACTTTGAAA GCCAAAGGCT
  CTAAACACAT TGCTGGCTTT GTCTTATGAT CAAGTGCCAC ACCTAGCGAC ATTTATGGAT
  TTGTTGAGGC ATAAATTGGT CGTGTCTTAG TTAGAATTTC TATTGCCATA AAACAGCATA
  ACTTGTGAGC AGTTTAGGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48392257	NES12275900	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29847210					SNP	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48392257	NES12275900	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:3899901 () rs orientation: forward

Symbol	Name	Function Class
Rr393189	regulatory region 393189	767 bp downstream