rs29847211 SNP Detail

Summary

• ID
  rs29847211
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:3899786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTGAGCAA TCACTACCTG
  GGCAGCAATT TTTACCTGTT TGCTACATGC TGCTTGCTTC ATCTCCTACT TACAGGTTTG
  TAAGGATAAA GGCTTTCTAC AGATTGAGGC CTGGTTCTGT ACCCTTCTAT GGGTTGATTT
  ATTGCTTGAA CCAATGGCCT TGCAAGGACA GACTGATCAC TTGTATATGC TGCTTTGTAG
  M
  TGGATAAATC CAAAGCCATA GTGAAACACA ATATAATCAA ATAGGCTGAC TGGGGAGTCA
  CAAGCAACAG TCTTGAATAA GGAAGCAAAG GCATTCTGTG CATGGCAGGG TTTGAAAACA
  TCTGCTTCAG AACATTGTCA TCCTAGGTTT CTGTCCACTT TGAAAGCCAA AGGCTCTAAA
  CACATTGCTG GCTTTGTCTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48392258	NES12275899	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29847211					SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48392258	NES12275899	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:3899786 () rs orientation: forward

Symbol	Name	Function Class
Rr393189	regulatory region 393189	652 bp downstream