rs29861461 SNP Detail

Summary

• ID
  rs29861461
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:31462817 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATTTTTTT TCTTTAATTT
  AAAGGTACAT TTATTTGTTT GTATGGGGCA GGGCTTCAGG ACACATGTTG AGGCTAGAGA
  CAGCTTGAGG GAGTTGGTTC TCTCCACCAT GTAGGTCCTG GGAAATAAAC CTGGGTCATG
  AGACTCTGCA GCAGGTACCT TCCCCTGCAG AGCCACCTAA AGGCCTAGTA CTGTATGGGT
  R
  TTTTGCACCT GAAGTTAGTC ACATTTTTGA GGAATACACC AGAACGAAAA GAGTTTTAGA
  TATATTGGTT TAAAAAGCCA TTAAAGTGAA ATTCAAACCT ATATTTGTCA TTTGGCACAT
  TGAATGCAGT CTGGGTCTTT TGAAAACTCC AATACTTACT GGATTTTATG GCAGGATCAT
  TTAGAGATTG GTTCATGACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss49575298	NES12862061	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs29861461					SNP	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49575298	NES12862061	PERLEGEN	MM_PANEL	f	SNP	A/G