rs29864922 SNP Detail

Summary

• ID
  rs29864922
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152654068 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTACAGCAGC AACATTTCTA
  GTGCCCCACC CCCACCCCCA AATGGGACAA AGGGCTTCTG AGGCAGACTG CTTGGGTTCA
  AAGCACTACT TTACCACCAC GTACTAGCTA CATTTCTGTG ATGTTTTCTT CTCTGTCCCT
  TCATTCTCCT CCACAATGAA ATTAAAAGAG TAATTCTTCC TGGTTTGAGT TTGTCTTTTG
  W
  TTTGTTTGTG TTTTTTGAGA TAGTGTCTCA AGACCTGAGT TTGATTCCTA ACATTCACGT
  GAAAAGCCAG GTGTGGTGTA TGCACCTGTA ACAATATTAC TTGAGCGATG GAGACAGGCT
  GGTCCCTGGG CCAGCTGTTT AGACGGAGCA GCAAGAGACC ATGTTTCAAA ATAAAGGAGA
  ATGACAGAGG AGGATAGTTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45371031	mCV27575714	ABI	CRAMUS_MOUSE	f	SNP	A	T	A	A
ss147974855	ENSMUSSNP351669	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29864922					SNP	A	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152654068 () rs orientation: forward

Symbol	Name	Function Class
A630035D09Rik	RIKEN cDNA A630035D09 gene	272 bp upstream
Bcl2l1	BCL2-like 1	within coordinates
Rr374093	regulatory region 374093	within coordinates
Rr567479	regulatory region 567479	within coordinates
Rr567480	regulatory region 567480	1250 bp proximal
Tssr20835	transcription start site region 20835	1676 bp downstream