rs29865726 SNP Detail

Summary

• ID
  rs29865726
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127433167 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACATCTGTC TTGTGGAGGA GATGCAGCTC TGTAACTAGC
  AGAGACATTT AGGTTATTTT GTTTTGAAAA TGTCTCGAAT TTTGTTGTTG TTGTTTTTTT
  W
  AAATAGATTT CTTTGTGTCT GTGTCTTGGC TGGAAGTAGG GGTAGGTCTG TACACATGAG
  TGGAGGTGCC TAAGGGGCCA GACAGAAGCA AGGGTTTCC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45369475	mCV23900243	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs29865726					SNP	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127433167 () rs orientation: forward

Symbol	Name	Function Class
Mrps5	mitochondrial ribosomal protein S5	Intron
Rr564568	regulatory region 564568	82 bp distal
Tssr20027	transcription start site region 20027	878 bp downstream
Tssr20028	transcription start site region 20028	488 bp downstream