rs29867046 SNP Detail

Summary

• ID
  rs29867046
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:55591187 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CGATTGCCTG CCATTCATAG CCCAGAGCCC TCTAGGAAAG
  CAAATTTACT CATCTCCTTA AAAATCTGCC TCCATGACTC CCCATTACCC TCAAAATGAA
  S
  TCCAAGGACA TCCTGGATCC AGGCTCCATC AAGACACTCT CCTCACTTCA TGGTTCCCGA
  GCCCACCCCA ATGCCCACTG CAAATTCTAC AGACGCTCT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39126764	mCV22990945	ABI	CRAMUS_MOUSE	f	SNP	C	G	G	C
ss149037081	ENSMUSSNP3398473	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G		C
ss324345518	CHEV_13_55544735	CHEVERUD	SCREENING_POP	f	SNP					C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29867046					SNP	C	G	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:55591187 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5671	CpG island 5671	1130 bp proximal
Gm61404	predicted gene, 61404	167 bp downstream
Grk6	G protein-coupled receptor kinase 6	1698 bp upstream
Rr281448	regulatory region 281448	413 bp proximal
Rr403797	regulatory region 403797	1485 bp upstream
Tssr119959	transcription start site region 119959	1927 bp upstream
Tssr122699	transcription start site region 122699	1500 bp downstream