rs29867062 SNP Detail

Summary

• ID
  rs29867062
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:72576977 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACACACCATA TATAAATGAA AACCAGAACA TGAGAAAGAA ATCAGGAAAA CATTACTTTG
  TACAGTCTCA AAAACATATC ACCTCTAAGC AAGGAATTGA AAGACTTATA TAATAAACAT
  TTAAAACATT GAAGAAGATA CTAAAAAATG GAAAAACTTT TCATTCATGG ATAGGAAAAA
  TTAGTTGTAA AAATACCATC CTACAAAAAC CAATCTATAG ATTCAGAGCA ATACCCATCA
  AAACTCCAAC ATAATTATTT TATATGGAAC AGTACACACA CACACACACA CACACACACA
  Y
  ACACACACAT GCACAACATA TATACACATA TAAATAAAAT AATCCTGGAC AATAAGAGAA
  CCGTTGAAGA TATCACTATT TTATTATTCA AGTTTTTCAT AGAAATGGTA ATACTGGCAG
  CATGGTATTG TAATAAAAAT ATGCATTGAT CAATAGATTT GAACTGAAGA CACAATCAAA
  GTTTACACAC CTACAGGCAT CTGACTTTTG ACACAGAAAT AAAAAATACA CACTAAAGAC
  ATTTTCATCA ATGGTGGTAA TAAAGCTGTA TGGCTTTATG TAGAAAAATT CAAATAGGTA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss39623190	mCV23439537	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29867062					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:72576977 () rs orientation: forward

Symbol	Name	Function Class
Tssr5368	transcription start site region 5368	639 bp upstream