rs29868015 SNP Detail

Summary

• ID
  rs29868015
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:105912701 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGGGACGTC TCAGACTTTA TTTTTAGGGA AAGTGTACTT
  AGTTTCTTTT AATGAGATAT AGTGATTCAG AGAGGATTAA TAACTACTAT AGACAATTTG
  M
  TTAAAAATCC AGACTGTTCC AATGTTCTAC TAGGCCAGCA TATACAAAAA CCAGTATAAG
  AAAATTTTTG TTCTTTTAAT TGTTTAATAT TTAAATATT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45371284	mCV23755361	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	C
ss147171314	ENSMUSSNP2185583	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C	C
ss320448479	CHEV_2_105922513	CHEVERUD	SCREENING_POP	f	SNP					A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29868015					SNP	A	A	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:105912701 () rs orientation: forward

Symbol	Name	Function Class
Dcdc5	doublecortin domain containing 5	within coordinates
Gm74997	predicted gene, 74997	within coordinates
Gm75005	predicted gene, 75005	within coordinates
Rr707	regulatory region 707	1038 bp proximal
Tssr19274	transcription start site region 19274	1426 bp downstream
Tssr19275	transcription start site region 19275	1352 bp downstream
Tssr19276	transcription start site region 19276	1321 bp downstream