rs29868769 SNP Detail

Summary

• ID
  rs29868769
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:127767236 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACTAGAGTC CACCGGACCT GTGATGCAAA AGTCAGTCGT
  GGTGCAATCC AAAGGGTCGA CAGAGAGTAC ATGAGTCATA ACGGTTGAGA AGGGGCGGGG
  R
  ATCCCCCAGA GACACCGACT GCAAACAGTA CTTGTAAGTA CTTGACTTTT ATAAAAGGAA
  GTGGTGACAG GCCAGTGTCA CAGAGTTTAG AATGGTGAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45870590	mCV23215016	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss133633252	ENSMUSSNP6028521	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321942301	CHEV_6_127740291	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29868769					SNP	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:127767236 () rs orientation: forward

Symbol	Name	Function Class
Gm40402	predicted gene, 40402	within coordinates
Gm66979	predicted gene, 66979	79 bp upstream
Rr151534	regulatory region 151534	within coordinates
Tssr59045	transcription start site region 59045	77 bp upstream