rs29868926 SNP Detail

Summary

• ID
  rs29868926
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:66056653 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGG TTCATTATCC CTAATCTCAC
  R
  TTGTATTGCA AGAACAAAGG TAATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss39624032	mCV23206784	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss325658633	CHEV_18_66083236	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs29868926					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:66056653 () rs orientation: forward

Symbol	Name	Function Class
Gm50118	predicted gene, 50118	1214 bp downstream
Gm50119	predicted gene, 50119	474 bp downstream
Gm58551	predicted gene, 58551	1899 bp upstream
Rr346799	regulatory region 346799	1053 bp distal
Rr346800	regulatory region 346800	748 bp proximal
Rr353052	regulatory region 353052	1252 bp distal
Rr353053	regulatory region 353053	1147 bp proximal
Rr393825	regulatory region 393825	631 bp upstream