rs29869817 SNP Detail

Summary

• ID
  rs29869817
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:83815271 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CGCCAGATTG GGAATTGAGT GGGGGTTTCC CCACTAGGTT CTATCACTAT CATACTGGGC
  CCCCATCTTA ACTCTTAAGT GCTCAGAGAG ATTTGCTTGC TGTTCAGTGG GATTTGGTGC
  TCATATTGCA CAAGCAAACA CCACAGTCAT CGAAAAATGT TTTCATCAGC TCTGACTAAA
  CTTCTGAACC CATTAAATAG TAATTTCTCA CCATTGTCTC CTGTCAATCA CAAGTCTGTT
  ACTTAGTGTC AGGATTGGGT GTTTCCAGGT TCTTCCTGTC TTATTCAAAG AACTGAGAAC
  W
  TGTGCAGAGC CTTTTAGTGT GCCACTTGGC AGGAGTCTGA CATTGGCCAA GGACAAGGAA
  ATGGGCTTCA GGCAGGAATC TGACATTAGG CCATGATAAG GAAGTAAGTT TCGGCAAGAA
  TCTAACTTTA GACTATAATA GGGAAGTGGG GTAAGGCAGG AATTTTAATC TTAGGGTGGA
  ACAAAAGAAG TTGGCATCAG GCAAGATTTT GGGCTTGGAC AAGGACTTGG GCTCAAGTAT
  TTTGGTCATT ATGACAAGCC CTTTTAAACA ACTGTCATGG GAGTAATCAC AGGACTTTGC
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45872388	mCV24607923	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29869817					SNP	A	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83815271 () rs orientation: forward

Symbol	Name	Function Class
Gm23014	predicted gene, 23014	1223 bp upstream
Rr632956	regulatory region 632956	1265 bp distal