rs29870611 SNP Detail

Summary

• ID
  rs29870611
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:19957568 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATGAATTC CGCCCTCTCC
  ATAAAGCTGG GATGTTTCAA TTCCCTTTGT ACTTTAAATG CCTATAATGT ATTGATATCA
  TCTGTGGGGT ATTAAAAATG AAAACTTGGG TTCTAGCAAG AAATAGTTGA TGATTATTAT
  CTGCAGTTTC AAACTTATTT TCTTTTAATT ATTGTCTATG CCAATTAAAA CTCACATGCC
  Y
  TTCTCCTACC CCAATTCTCT GCCTGCCTGT GACTCCTACA GACAAATCAA GCAGTGGAAG
  GTTCTACCCT ATCCCTTTTA CACCCCATTC ACAAGGCCAC AGATTTGTCT GCATCCCTGG
  ACAATCAGGT GATATCACCA TTCCCTTGCT CACTTTGTCC CCAGCAAGTC TAGTAGAAGT
  CTTGAGGATT GCCCTGTCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45873102	mCV24720423	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T	T
ss133058550	ENSMUSSNP5445653	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29870611					SNP	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:19957568 () rs orientation: forward

Symbol	Name	Function Class
Rr379021	regulatory region 379021	696 bp upstream