rs29871205 SNP Detail

Summary

• ID
  rs29871205
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:61845742 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCTT GTATTTATGT GGACAACAGA
  Y
  TTTGGTTCTT CTAGTGACCC AGTTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ
ss39624261	mCV23485165	ABI	CRAMUS_MOUSE	f	SNP	T	C		T		T
ss50425984	NES13455471	PERLEGEN	MM_PANEL2	f	SNP		C	T		T	T	T
ss147260025	ENSMUSSNP6052055	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C				T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ
rs29871205					SNP	T	C	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50425984	NES13455471	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:61845742 () rs orientation: forward

Symbol	Name	Function Class
Gm17883	predicted gene, 17883	1024 bp upstream
Grpel2	GrpE-like 2, mitochondrial	within coordinates