rs29872776 SNP Detail

Summary

• ID
  rs29872776
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:37089072 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTATG CGATTCAGTG ATGACGTCAT
  Y
  AGCACTGTAT CACACGCCTC CTGCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46349107	mCV24874275	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	C
ss136309016	ENSMUSSNP1229890	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C
ss322906202	CHEV_9_36985361	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29872776					SNP	C	C	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:37089072 () rs orientation: forward

Symbol	Name	Function Class
Gm67648	predicted gene, 67648	within coordinates
Rr401317	regulatory region 401317	388 bp downstream
Rr676635	regulatory region 676635	1356 bp distal
Rr676636	regulatory region 676636	373 bp distal
Rr676637	regulatory region 676637	496 bp distal
Rr676638	regulatory region 676638	within coordinates
Rr676639	regulatory region 676639	804 bp proximal