TAGAGACTGT CTCTGTTAGA GCTCTCTCTG ACCCCAAGGC TTCGTCTGTC TTCCATCACT CCTCTCCAAA CAGAACACAG GTTGGGAATG ATGAACAACA R TGCGAGTCAG GACTTGAAAG ACAGACAGCT CCTCAGCTTA CCAAGGGCAG GCTATTCCCT ACAGGACCGC TTGGGGGCTC CAGGCACCAT CCAGTGAGC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
DBA/2J |
---|---|---|---|---|---|---|---|---|---|
ss45373352 | mCV22912877 | ABI | CRAMUS_MOUSE | f | SNP | A | A | G | G |
ss148398538 | ENSMUSSNP1156903 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | G | G | |
SNP Consensus Information | |||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
DBA/2J |
||||
rs29874214 | SNP | A | A | G | G |
Location: Chr2:180828453 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
C330003G01Rik | RIKEN cDNA C330003G01 gene | within coordinates | ||||||
Cpgi12916 | CpG island 12916 | 124 bp proximal | ||||||
Gm75115 | predicted gene, 75115 | within coordinates | ||||||
Ppdpf | pancreatic progenitor cell differentiation and proliferation factor | 587 bp upstream | ||||||
Rr374383 | regulatory region 374383 | 432 bp upstream | ||||||
Rr572939 | regulatory region 572939 | 97 bp proximal | ||||||
Rr572940 | regulatory region 572940 | 616 bp proximal | ||||||
Rr572941 | regulatory region 572941 | 687 bp proximal | ||||||
Rr572942 | regulatory region 572942 | 1043 bp proximal | ||||||
Rr572943 | regulatory region 572943 | 1984 bp proximal | ||||||
Tssr22287 | transcription start site region 22287 | 615 bp upstream | ||||||
Tssr22288 | transcription start site region 22288 | 715 bp upstream | ||||||
Tssr22289 | transcription start site region 22289 | 849 bp upstream | ||||||
Tssr22290 | transcription start site region 22290 | 937 bp upstream | ||||||
Tssr22291 | transcription start site region 22291 | 976 bp upstream | ||||||
Tssr22292 | transcription start site region 22292 | 1119 bp upstream | ||||||
Tssr22293 | transcription start site region 22293 | 1217 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 07/22/2025 MGI 6.24 |
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